PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G104000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WOX
Protein Properties Length: 289aa    MW: 32625.7 Da    PI: 6.674
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G104000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.4e-203394257
                         T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         ++R+t+t++q+++L++l+++   r psae++++++++l    +++ ++V++WFqN++a+e++
  Manes.02G104000.1.p 33 STRWTPTTDQIRILKDLYYNsgVRSPSAEQIQKISARLrqygKIEGKNVFYWFQNHKARERQ 94
                         58*****************8789*************************************97 PP

2Wus_type_Homeobox114.36.2e-373296265
    Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                         ++tRWtPt++Qi+iL++ly+ sG+r+P++e+iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Manes.02G104000.1.p 32 SSTRWTPTTDQIRILKDLYYnSGVRSPSAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQKK 96
                         789***************9779*****************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-112699IPR009057Homeodomain-like
PROSITE profilePS5007110.5272995IPR001356Homeobox domain
SMARTSM003894.3E-53199IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.7E-73494IPR009057Homeodomain-like
CDDcd000863.33E-63496No hitNo description
PfamPF000462.4E-173494IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MEPQQQQQQQ NQQLQNEDSN SGVKGSFLCR QSSTRWTPTT DQIRILKDLY YNSGVRSPSA  60
EQIQKISARL RQYGKIEGKN VFYWFQNHKA RERQKKRFTT DVPMQQRTVS NASNWKPEDY  120
PFHNKYPNTT SGFSSSSPSS AGGSTVGQMG NYGYRSVTIE NSFRDCLIPA GANSGVVGSM  180
SPSYGWVGID TYSSAYSHFD KRKSSNEILE GEEREVQEEE AITQEIETLP LFPTQREDTN  240
GILCNLKHNP ICYPHNYWYG SDDGNNTSRT FLELSLNSYG NGQAPDSI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002530735.11e-109PREDICTED: protein WUSCHEL
SwissprotQ8LL118e-76WUS_PETHY; Protein WUSCHEL
TrEMBLB9SXL61e-109B9SXL6_RICCO; Protein WUSCHEL, putative
STRINGGLYMA01G37190.25e-94(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82413345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-40WOX family protein